Index

A

abundance_df (chemoecology_tools.GCMSExperiment attribute)

C

calculate_relative_abundance() (chemoecology_tools.GCMSExperiment method) chemical_metadata (chemoecology_tools.GCMSExperiment attribute)

chemoecology_tools module

E

experiment_name (chemoecology_tools.GCMSExperiment attribute)

F

filter_samples() (chemoecology_tools.GCMSExperiment method)

filter_trace_compounds() (chemoecology_tools.GCMSExperiment method) from_files() (chemoecology_tools.GCMSExperiment class method)

G

GCMSExperiment (class in chemoecology_tools) get_abundance_matrix() (chemoecology_tools.GCMSExperiment method)

get_chemical_property() (chemoecology_tools.GCMSExperiment method) get_chemicals_by_property() (chemoecology_tools.GCMSExperiment method) get_metadata() (chemoecology_tools.GCMSExperiment method)

I

id_col (chemoecology_tools.GCMSExperiment attribute)

M

merge() (chemoecology_tools.GCMSExperiment method) metadata_df (chemoecology_tools.GCMSExperiment attribute)

module chemoecology_tools

P

perform_nmds() (in module chemoecology_tools)

plot_nmds() (in module chemoecology_tools)

S

setup_plotting_style() (in module chemoecology_tools)